- New York Mets selected Gil Hodges in free agent draft on October 10, 1961.
- New York Mets selected Roger Craig in free agent draft on October 10, 1961.
- New York Mets traded Lee Walls to the Los Angeles Dodgers for Charlie Neal and Willard Hunter on December 15, 1961.
- New York Mets purchased Dick Smith and Norm Sherry from the Los Angeles Dodgers on October 11, 1962.
- New York Mets traded Bob Miller to the Los Angeles Dodgers for Tim Harkness and Larry Burright on December 1, 1962.
- New York Mets purchased Duke Snider from the Los Angeles Dodgers on April 1, 1963.
- New York Mets traded Dick Smith to the Los Angeles Dodgers for Larry Miller on October 15, 1964.
- New York Mets claimed Greg Goossen on waivers from the Los Angeles Dodgers on April 9, 1965.
- New York Mets selected Bart Shirley in free agent draft on November 28, 1966.
- New York Mets traded Ron Hunt and Jim Hickman to the Los Angeles Dodgers for Tommy Davis and Derrell Griffith on November 29, 1966.
- New York Mets purchased Bill Sudakis from the Los Angeles Dodgers on March 27, 1972.
- New York Mets traded Hank Webb and Richard Sander to the Los Angeles Dodgers for Rick Auerbach on February 7, 1977.
- New York Mets traded Jerry Grote to the Los Angeles Dodgers for Dan Smith and Randy Rogers on August 31, 1977.
- New York Mets selected Mike Howard in free agent draft on December 5, 1978.
- New York Mets traded Pat Zachry to the Los Angeles Dodgers for Jorge Orta on December 28, 1982.
- New York Mets traded Jody Johnston and Steve Walker to the Los Angeles Dodgers for Mark Bradley on March 29, 1983.
- New York Mets traded Bob Bailor and Carlos Diaz to the Los Angeles Dodgers for Sid Fernandez and Ross Jones on December 8, 1983.
- Los Angeles Dodgers signed Danny Heep of the New York Mets as a free agent on June 12, 1987.
- New York Mets traded John Gibbons to the Los Angeles Dodgers for Craig Shipley on April 1, 1988.
- New York Mets traded Juan Samuel to the Los Angeles Dodgers for Mike Marshall and Alejandro Pena on December 20, 1989.
- Los Angeles Dodgers signed Don Aase of the New York Mets as a free agent on February 20, 1990.
- Los Angeles Dodgers signed Darryl Strawberry of the New York Mets as a free agent on November 8, 1990.
- New York Mets traded Bob Ojeda and Greg Hansell to the Los Angeles Dodgers for Hubie Brooks on December 15, 1990.
- New York Mets signed free agent Eddie Murray of the Los Angeles Dodgers on November 27, 1991.
- Los Angeles Dodgers signed Kevin Elster of the New York Mets as a free agent on January 12, 1993.
- Los Angeles Dodgers signed Lee Guetterman of the New York Mets as a free agent on January 13, 1993.
- New York Mets traded Brett Butler to the Los Angeles Dodgers for Scott Hunter and Dwight Maness on August 18, 1995.
- New York Mets traded Dave Mlicki and Greg McMichael to the Los Angeles Dodgers for Hideo Nomo and Brad Clontz on June 4, 1998.
- New York Mets traded Brian Bohanon to the Los Angeles Dodgers for Greg McMichael on July 10, 1998.
- New York Mets traded Mel Rojas to the Los Angeles Dodgers for Bobby Bonilla on November 11, 1998.
- New York Mets traded Todd Hundley and Arnold Gooch to the Los Angeles Dodgers for Roger Cedeno and Charles Johnson on December 1, 1998.
- Los Angeles Dodgers signed Rick Wilkins of the New York Mets as a free agent on March 6, 1999.
- Los Angeles Dodgers signed Orel Hershiser of the New York Mets as a free agent on December 5, 1999.
- New York Mets claimed McKay Christensen on waivers from the Los Angeles Dodgers on April 3, 2002.
- New York Mets traded Jeromy Burnitz to the Los Angeles Dodgers for Victor Diaz, Kole Strayhorn and Joselo Diaz on July 14, 2003.
- New York Mets traded Tom Wilson to the Los Angeles Dodgers for Tony Socarras on August 17, 2004.
- New York Mets traded Jason Phillips to the Los Angeles Dodgers for Kazuhisa Ishii on March 20, 2005.
- New York Mets signed free agent Jose Valentin of the Los Angeles Dodgers on December 12, 2005.
- New York Mets traded Jae Weong Seo and Tim Hamulack to the Los Angeles Dodgers for Duaner Sanchez and Steve Schmoll on January 4, 2006.
- Los Angeles Dodgers signed Craig Brazell of the New York Mets as a free agent on March 7, 2006.
- New York Mets claimed Ricky Ledee on waivers from the Los Angeles Dodgers on August 7, 2006.
- New York Mets signed free agent Aaron Sele of the Los Angeles Dodgers on January 25, 2007.
- New York Mets signed free agent Marlon Anderson of the Los Angeles Dodgers on July 12, 2007.
- Los Angeles Dodgers signed Claudio Vargas of the New York Mets as a free agent on December 31, 2008.
- Los Angeles Dodgers signed Val Pascucci of the New York Mets as a free agent on January 7, 2009.
- Los Angeles Dodgers signed Angel Berroa of the New York Mets as a free agent on December 17, 2009.
- Los Angeles Dodgers signed Argenis Reyes of the New York Mets as a free agent on January 12, 2010.
- Los Angeles Dodgers claimed Rod Barajas of the New York Mets on waivers on August 22, 2010.
- New York Mets traded Mike Antonini to the Los Angeles Dodgers for Chin-lung Hu on December 7, 2010.
- Los Angeles Dodgers signed Chris Capuano of the New York Mets as a free agent on December 2, 2011.
- Los Angeles Dodgers claimed Mike Baxter of the New York Mets on waivers on October 17, 2013.
- Los Angeles Dodgers signed Justin Turner of the New York Mets as a free agent on February 5, 2014.
- New York Mets traded Curtis Granderson to the Los Angeles Dodgers for Jacob Rhame on August 19, 2017.
- Los Angeles Dodgers signed Travis Taijeron of the New York Mets as a free agent on November 20, 2017.
- New York Mets traded Billy McKinney to the Los Angeles Dodgers for Carlos Rincon on July 21, 2021.
- Los Angeles Dodgers signed Nick Tropeano of the New York Mets as a free agent on August 7, 2021.
- New York Mets signed free agent Max Scherzer of the Los Angeles Dodgers on December 1, 2021.
- Los Angeles Dodgers signed Daniel Zamora of the New York Mets as a free agent on March 16, 2022.
- Los Angeles Dodgers signed Kevin Pillar of the New York Mets as a free agent on March 24, 2022.
- Los Angeles Dodgers signed Dellin Betances of the New York Mets as a free agent on April 7, 2022.
- Los Angeles Dodgers claimed Jake Reed of the New York Mets on waivers on July 13, 2022.
- Los Angeles Dodgers signed Patrick Mazeika of the New York Mets as a free agent on December 13, 2022.
- New York Mets signed free agent J.D. Martinez of the Los Angeles Dodgers on March 23, 2023.
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